Cross-genera SSR transferability in cacti revealed by a case study using Cereus (Cereeae, Cactaceae)

以蜡样属 (Cereeae, 仙人掌科) 为例,揭示了仙人掌跨属 SSR 的可转移性

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作者:Juliana Rodrigues Bombonato, Isabel Aparecida Silva Bonatelli, Gislaine Angélica Rodrigues Silva, Evandro Marsola Moraes, Daniela Cristina Zappi, Nigel P Taylor, Fernando Faria Franco

Abstract

The study of transferability of simple sequence repeats (SSR) among closely related species is a well-known strategy in population genetics, however transferability among distinct genera is less common. We tested cross-genera SSR amplification in the family Cactaceae using a total of 20 heterologous primers previously developed for the genera Ariocarpus, Echinocactus, Polaskia and Pilosocereus, in four taxa of the genus Cereus: C. fernambucensis subsp. fernambucensis, C. fernambucensis subsp. sericifer, C. jamacaru and C. insularis. Nine microsatellite loci were amplified in Cereus resulting in 35.2% of success in transferability, which is higher than the average rate of 10% reported in the literature for cross-genera transferability in eudicots. The genetic variation in the transferred markers was sufficient to perform standard clustering analysis, indicating each population as a cohesive genetic cluster. Overall, the amount of genetic variation found indicates that the transferred SSR markers might be useful in large-scale population studies within the genus Cereus.

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