Proteins that contain the DUF2874 domain constitute a new Pfam family PF11396. Members of this family have predominantly been identified in microbes found in the human gut and oral cavity. The crystal structure of one member of this family, BVU2987 from Bacteroides vulgatus, has been determined, revealing a β-lactamase inhibitor protein-like structure with a tandem repeat of domains. Sequence analysis and structural comparisons reveal that BVU2987 and other DUF2874 proteins are related to β-lactamase inhibitor protein, PepSY and SmpA_OmlA proteins and hence are likely to function as inhibitory proteins.
The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function.
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作者:Das Debanu, Finn Robert D, Carlton Dennis, Miller Mitchell D, Abdubek Polat, Astakhova Tamara, Axelrod Herbert L, Bakolitsa Constantina, Chen Connie, Chiu Hsiu Ju, Chiu Michelle, Clayton Thomas, Deller Marc C, Duan Lian, Ellrott Kyle, Ernst Dustin, Farr Carol L, Feuerhelm Julie, Grant Joanna C, Grzechnik Anna, Han Gye Won, Jaroszewski Lukasz, Jin Kevin K, Klock Heath E, Knuth Mark W, Kozbial Piotr, Krishna S Sri, Kumar Abhinav, Marciano David, McMullan Daniel, Morse Andrew T, Nigoghossian Edward, Nopakun Amanda, Okach Linda, Puckett Christina, Reyes Ron, Rife Christopher L, Sefcovic Natasha, Tien Henry J, Trame Christine B, van den Bedem Henry, Weekes Dana, Wooten Tiffany, Xu Qingping, Hodgson Keith O, Wooley John, Elsliger Marc André, Deacon Ashley M, Godzik Adam, Lesley Scott A, Wilson Ian A
| 期刊: | Acta Crystallographica Section F-Structural Biology and Crystallization Communications | 影响因子: | 1.100 |
| 时间: | 2010 | 起止号: | 2010 Oct 1; 66(Pt 10):1265-73 |
| doi: | 10.1107/S1744309109046788 | ||
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