Agrobacterium rhizogenes induce the production of the hairy root through the transformation of plant genomes. In this article, we executed the transcriptome of A. rhizogenes through RNA-sequencing. RNA-sequencing of A. rhizogenes generated a total of 2.6 Gb raw data with a 75â¯bp paired-end sequence. The raw data has been submitted to the SRA database of NCBI with accession number SRR5641651. Reads were generated 2946 unigenes and all unigenes were annotated in the database. The length of transcripts ranged from 90 to 6369â¯bp, with a median transcript length of 968. The transcripts were annotated through the number of databases to obtain information about SSRs, SNPs, Gene Ontology, Transcription factors, and pathways analysis .
Insight in the transcriptome data of hairy root disease-causing bacterium-Agrobacterium rhizogenes.
对引起毛状根病的细菌——根癌农杆菌的转录组数据进行深入研究
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作者:Yadav Akhilesh, Verma Hariom, Ansari Waquar Akhter, Singh Asha Lata, Singh Major
| 期刊: | Data in Brief | 影响因子: | 1.400 |
| 时间: | 2020 | 起止号: | 2020 Jun 21; 31:105910 |
| doi: | 10.1016/j.dib.2020.105910 | 研究方向: | 肿瘤 |
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