Repeated Coronavirus Disease 2019 Molecular Testing: Correlation of Severe Acute Respiratory Syndrome Coronavirus 2 Culture With Molecular Assays and Cycle Thresholds

重复冠状病毒病 2019 分子检测:严重急性呼吸道综合征冠状病毒 2 培养与分子检测和循环阈值的相关性

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作者:Victoria Gniazdowski, C Paul Morris, Shirlee Wohl, Thomas Mehoke, Srividya Ramakrishnan, Peter Thielen, Harrison Powell, Brendan Smith, Derek T Armstrong, Monica Herrera, Carolyn Reifsnyder, Maria Sevdali, Karen C Carroll, Andrew Pekosz, Heba H Mostafa

Background

Repeated coronavirus disease 2019 (COVID-19) molecular testing can lead to positive test

Conclusions

Low Ct values in SARS-CoV-2 diagnostic tests were associated with virus growth in cell culture. Symptomatic patients with prolonged viral RNA shedding can also be infectious.

Methods

A 2-month cohort of retrospective data and consecutively collected specimens from patients with COVID-19 or patients under investigation were used to understand the correlation between prolonged viral RNA positive test

Results

In 2 months, 29 686 specimens were tested and 2194 patients underwent repeated testing. Virus recovery in cell culture was noted in specimens with a mean Ct value of 18.8 (3.4) for SARS-CoV-2 target genes. Prolonged viral RNA shedding was associated with positive virus growth in culture in specimens collected up to 21 days after the first positive result but mostly in individuals symptomatic at the time of sample collection. Whole-genome sequencing provided evidence the same virus was carried over time. Positive test results following negative results had Ct values >29.5 and were not associated with virus culture. Droplet digital polymerase chain reaction results were positive in 5.6% of negative specimens collected from patients with confirmed or clinically suspected COVID-19. Conclusions: Low Ct values in SARS-CoV-2 diagnostic tests were associated with virus growth in cell culture. Symptomatic patients with prolonged viral RNA shedding can also be infectious.

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