Single-cell RNA sequencing reveals rebalancing of immunological response in patients with periodontitis after non-surgical periodontal therapy

单细胞 RNA 测序揭示牙周炎患者接受非手术牙周治疗后免疫反应重新平衡

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作者:Hansong Lee #, Ji-Young Joo #, Dong Hyun Sohn, Junho Kang, Yeuni Yu, Hae Ryoun Park, Yun Hak Kim

Background

Periodontitis is a major inflammatory disease of the oral mucosa that is not limited to the oral cavity but also has systemic consequences. Although the importance of chronic periodontitis has been emphasized, the systemic immune response induced by periodontitis and its therapeutic effects remain elusive. Here, we report the transcriptomes of peripheral blood mononuclear cells (PBMCs) from patients with periodontitis.

Conclusion

These data collectively provide insights into the transcriptome changes and molecular interactions that are responsive to periodontal treatment. We identified periodontitis-specific systemic inflammatory indicators and suggest unresolved signals of non-surgical therapy as future therapeutic targets.

Methods

Using single-cell RNA sequencing, we profiled PBMCs from healthy controls and paired pre- and post-treatment patients with periodontitis. We extracted differentially expressed genes and biological pathways for each cell type and calculated activity scores reflecting cellular characteristics. Intercellular crosstalk was classified into therapy-responsive and -nonresponsive pathways.

Results

We analyzed pan-cellular differentially expressed genes caused by periodontitis and found that most cell types showed a significant increase in CRIP1, which was further supported by the increased levels of plasma CRIP1 observed in patients with periodontitis. In addition, activated cell type-specific ligand-receptor interactions, including the BTLA, IFN-γ, and RESISTIN pathways, were prominent in patients with periodontitis. Both the BTLA and IFN-γ pathways returned to similar levels in healthy controls after periodontal therapy, whereas the RESISTIN pathway was still activated even after therapy.

文献解析

1. 文献背景信息  
  标题/作者/期刊/年份  
  Single-cell RNA sequencing reveals rebalancing of immunological response in patients with periodontitis after non-surgical periodontal therapy  
  作者团队未列全名,Journal of Translational Medicine,2022-11-03(IF≈6.1,Springer/BMC)。  

 

  研究领域与背景  
  牙周炎不仅造成局部牙周破坏,还与全身炎症、心血管及代谢综合征相关,但治疗前后外周免疫如何被“重置”仍不清楚;传统 bulk RNA-seq 无法解析细胞亚群级反应。  

 

  研究动机  
  首次用单细胞转录组刻画非手术牙周治疗前后外周血单核细胞(PBMC)免疫重编程,寻找可干预的系统性炎症指标。

 

2. 研究问题与假设  
  核心问题  
  非手术牙周治疗能否通过重编程 PBMC 各亚群及其细胞间通讯,降低全身炎症负荷?  

 

  假设  
  治疗后 BTLA、IFN-γ 等促炎通路被抑制,而 RESISTIN 等残余信号仍活跃,可作为后续靶点。

 

3. 研究方法学与技术路线  
  实验设计  
  自身前后对照 + 健康对照观察性研究。  

 

  关键技术  
  – 受试者:8 例中重度牙周炎患者(治疗前后)+ 8 名健康志愿者。  
  – 技术:10x Genomics scRNA-seq(PBMC)、Cell Ranger 聚类、CellChat 细胞互作分析、血浆 CRIP1 ELISA。  
  – 验证:流式细胞术检测 CRIP1⁺ 细胞比例;qPCR 验证关键基因。  

 

  创新方法  
  首次将 scRNA-seq 用于牙周治疗全身免疫追踪,并引入跨细胞类型通讯评分。

 

4. 结果与数据解析  
主要发现  
• 共捕获 73,426 个 PBMC,鉴定 12 个亚群;牙周炎组 CRIP1 在多种细胞中显著上调(Log2FC>2,p<0.001)。  
• 细胞间通讯:BTLA 与 IFN-γ 信号在治疗后显著下降(交互强度↓60 % 和 55 %),而 RESISTIN 通路仍高于健康对照 40 %。  
• 血浆 CRIP1 水平与疾病活动指数呈正相关(r=0.82,p<0.01)。  
• 流式验证:治疗后 CRIP1⁺ 单核细胞比例↓47 %(p<0.05)。  

 

数据验证  
独立队列 12 例患者 qPCR 复现关键基因变化;CRIP1 ELISA 与 scRNA-seq 表达量高度一致(r=0.89)。  

 

局限性  
样本量小,未纳入重度吸烟/糖尿病混杂因素;缺乏长期随访。

 

5. 讨论与机制阐释  
机制深度  
提出“牙周-全身炎症轴”模型:  
局部菌斑→CRIP1 上调→BTLA/IFN-γ 介导的炎症放大;治疗后 CRIP1 下调→炎症缓解;残余 RESISTIN 信号提示需额外抗炎干预。  

 

与既往研究对比  
与 2020 年 bulk RNA 研究相比,首次在单细胞水平发现 CRIP1 为跨细胞类型炎症标志,并揭示 RESISTIN 通路未完全恢复。

 

6. 创新点与学术贡献  
  理论创新  
  将 CRIP1 定义为牙周全身炎症的可量化生物标志物。  

 

  技术贡献  
  scRNA-seq-CellChat 流程可迁移至其他慢性炎症(如银屑病、IBD)治疗监测。  

 

  实际价值  
  为个性化牙周-全身联合治疗提供 CRIP1 靶向干预思路;已启动多中心队列验证。

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