The Addition of Transcriptomics to the Bead-Enabled Accelerated Monophasic Multi-Omics Method: A Step toward Universal Sample Preparation

将转录组学添加到基于微珠的加速单相多组学方法中:迈向通用样品制备的一步

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作者:Joshua D Breidenbach ,Emilio S Rivera ,Tara Harvey ,Abigale S Mikolitis ,Chi Yen Tseng ,Claire K Sanders ,Emilia Solomon ,Cheryl D Gleasner ,M Grace Thornhill ,Kes A Luchini ,Ethan M McBride ,Brett R Blackwell ,Erick S LeBrun ,Phillip M Mach ,Trevor G Glaros

Abstract

Omics-based measurements enable the study of biomolecules in a high-throughput fashion, leading to the characterization and quantification of biological systems. Multi-omics methods aim to incorporate several omics measurements for a more holistic approach, which is crucial for advancing our understanding of the diversity and redundancy of biological systems. Current multi-omics sample preparation methods have achieved proteomics, lipidomics, and metabolomics from individual samples; however, the bioinformatic tools currently available for interpreting data generated from these omics are limited. Alternately, transcriptomics has a wide arsenal of available bioinformatic tools offering intensive sample characterization but has yet to be incorporated into a unified, multi-omics sample preparation technique. Herein we describe the modified bead-enabled accelerated monophasic multi-omics (mBAMM) method, which incorporates RNA extraction for transcriptomics analysis. mBAMM was shown to enable RNA-seq without compromising the isolation of biomolecules for proteomics, lipidomics, and metabolomics. This methodology greatly improves sample characterization and represents a major innovation toward cohesive insights into biological systems.

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