Protocol for PPP1R15A-inhibited mouse model establishment with subcutaneous B16F1 tumor and single-cell analysis

利用皮下B16F1肿瘤和单细胞分析建立PPP1R15A抑制小鼠模型的实验方案

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作者:Rongjing Wang ,Minghui Wang ,Siyu Pei ,Yuchao Zhang ,Shiwei Guo ,Wei Guo ,Zhenchuan Wu ,Hailong Wang ,Yizhe Li ,Yufei Zhu ,Ling-Hua Meng ,Jingyu Lang ,Gang Jin ,Yichuan Xiao ,Landian Hu ,Xiangyin Kong

Abstract

Here, we present a protocol for exploring the effects of PPP1R15A inhibitor, Sephin1, on antitumor immunity of B16F1 subcutaneous tumor in mice. We describe steps for constructing single-cell transcriptome and TCR libraries, sequencing, and using sequencing data for the integration of expression and TCR data. We then detail procedures for gene differentiation, regulon and cell-cell communication analysis, and validation of single-cell analysis results. For complete details on the use and execution of this protocol, please refer to Wang et al.1.

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