Integration of GWAS, QTLs and keratinocyte functional assays reveals molecular mechanisms of atopic dermatitis.

GWAS、QTL 和角质形成细胞功能检测的整合揭示了特应性皮炎的分子机制

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作者:Oliva Meritxell, Sarkar Mrinal K, March Michael E, Saeidian Amir Hossein, Mentch Frank D, Hsieh Chen-Lin, Tang Fanying, Uppala Ranjitha, Patrick Matthew T, Li Qinmengge, Bogle Rachael, Kahlenberg J Michelle, Watson Deborah, Glessner Joseph T, Youssefian Leila, Vahidnezhad Hassan, Tsoi Lam C, Hakonarson Hakon, Gudjonsson Johann E, Smith Kathleen M, Riley-Gillis Bridget
Atopic dermatitis is a highly heritable and common inflammatory skin condition affecting children and adults worldwide. Multi-ancestry approaches to atopic dermatitis genetic association studies are poised to boost power to detect genetic signal and identify loci contributing to atopic dermatitis risk. Here, we present a multi-ancestry GWAS meta-analysis of twelve atopic dermatitis cohorts from five ancestral populations totaling 56,146 cases and 602,280 controls. We report 101 genomic loci associated with atopic dermatitis, including 16 loci that have not been previously associated with atopic dermatitis or eczema. Fine-mapping, QTL colocalization, and cell-type enrichment analyses identified genes and cell types implicated in atopic dermatitis pathophysiology. Functional analyses in keratinocytes provide evidence for genes that could play a role in atopic dermatitis through epidermal barrier function. Our study provides insights into the etiology of atopic dermatitis by harnessing multiple genetic and functional approaches to unveil the mechanisms by which atopic dermatitis-associated variants impact genes and cell types.

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