BACKGROUND: Calcium (Ca2+) propagates within tissues serving as an important information carrier. In particular, cilia beat frequency in oviduct cells is partially regulated by Ca2+ changes. Thus, measuring the calcium density and characterizing the traveling wave plays a key role in understanding biological phenomena. However, current methods to measure propagation velocities and other wave characteristics involve several manual or time-consuming procedures. This limits the amount of information that can be extracted, and the statistical quality of the analysis. RESULTS: Our work provides a framework based on image processing procedures that enables a fast, automatic and robust characterization of data from two-filter fluorescence Ca2+ experiments. We calculate the mean velocity of the wave-front, and use theoretical models to extract meaningful parameters like wave amplitude, decay rate and time of excitation. CONCLUSIONS: Measurements done by different operators showed a high degree of reproducibility. This framework is also extended to a single filter fluorescence experiments, allowing higher sampling rates, and thus an increased accuracy in velocity measurements.
Calcium (Ca2+) waves data calibration and analysis using image processing techniques.
利用图像处理技术对钙(Ca2+)波数据进行校准和分析
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作者:Milovic Carlos, Oses Carolina, Villalón Manuel, Uribe Sergio, Lizama Carlos, Prieto Claudia, Andia Marcelo E, Irarrazaval Pablo, Tejos Cristian
| 期刊: | BMC Bioinformatics | 影响因子: | 3.300 |
| 时间: | 2013 | 起止号: | 2013 May 16; 14:162 |
| doi: | 10.1186/1471-2105-14-162 | 研究方向: | 其它 |
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