Structural and genetic basis of HIV-1 envelope V2 apex recognition by rhesus broadly neutralizing antibodies

恒河猴广谱中和抗体识别HIV-1包膜V2顶端的结构和遗传基础

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作者:Ryan S Roark # ,Rumi Habib # ,Jason Gorman ,Hui Li ,Andrew Jesse Connell ,Mattia Bonsignori ,Yicheng Guo ,Michael P Hogarty ,Adam S Olia ,Kirsten J Sowers ,Baoshan Zhang ,Frederic Bibollet-Ruche ,Tatsiana Bylund ,Sean Callaghan ,John W Carey ,Gabriele Cerutti ,Darcy R Harris ,Wanting He ,Emily Lewis ,Tracy Liu ,Rosemarie D Mason ,Yujie Qiao ,Younghoon Park ,Juliette M Rando ,Ajay Singh ,Jeremy J Wolff ,Q Paula Lei ,Mark K Louder ,Raiees Andrabi ,Nicole A Doria-Rose ,Kevin O Saunders ,Michael S Seaman ,Barton F Haynes ,Daniel W Kulp ,John R Mascola ,Mario Roederer ,Theodore C Pierson ,Zizhang Sheng ,Beatrice H Hahn ,George M Shaw ,Peter D Kwong ,Lawrence Shapiro
Broadly neutralizing antibodies targeting the V2 apex of HIV-1 envelope are desired as vaccine design templates, but few have been described. Here, we report 11 lineages of V2 apex-neutralizing antibodies from simian-human immunodeficiency virus (SHIV)-infected rhesus macaques and determine cryo-EM structures for 9. A single V2 apex-neutralizing lineage accounted for cross-clade breadth in most macaques, and somatic hypermutation relative to breadth was generally low, exemplified by antibody V033-a.01 with <5% nucleotide mutation and 37% breadth (208-strain panel). Envelope complex structures revealed eight different antibody classes (one multi-donor) and the complete repertoire of all five possible recognition topologies, recapitulating canonical human modes of apex insertion and C-strand hydrogen bonding. Despite this diversity in recognition, all rhesus-V2 apex antibodies were derived from reading frame two of the DH3-15*01 gene. Collectively, these results define-in rhesus-the structural and genetic basis of HIV-1 V2 apex recognition and demonstrate unprecedented structural plasticity of a highly selected immunogenetic element.

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