The reaction-diffusion equation is widely used in mathematical models of cancer. The calibration of model parameters based on limited clinical data is critical to using reaction-diffusion equation simulations for reliable predictions on a per-patient basis. Here, we focus on cell-level data as routinely available from tissue biopsies used for clinical cancer diagnosis. We analyze the spatial architecture in biopsy tissues stained with multiplex immunofluorescence. We derive a two-point correlation function and the corresponding spatial power spectral distribution. We show that this data-deduced power spectral distribution can fit the power spectrum of the solution of reaction-diffusion equations that can then identify patient-specific tumor growth and invasion rates. This approach allows the measurement of patient-specific critical tumor dynamical properties from routinely available biopsy material at a single snapshot in time.
Calibrating tumor growth and invasion parameters with spectral spatial analysis of cancer biopsy tissues.
利用癌症活检组织的光谱空间分析校准肿瘤生长和侵袭参数
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作者:Pasetto Stefano, Montejo Michael, Zahid Mohammad U, Rosa Marilin, Gatenby Robert, Schlicke Pirmin, Diaz Roberto, Enderling Heiko
| 期刊: | npj Systems Biology and Applications | 影响因子: | 3.500 |
| 时间: | 2024 | 起止号: | 2024 Oct 2; 10(1):112 |
| doi: | 10.1038/s41540-024-00439-0 | 研究方向: | 肿瘤 |
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