Multi-omic profiling of follicular lymphoma reveals changes in tissue architecture and enhanced stromal remodeling in high-risk patients

滤泡性淋巴瘤的多组学分析揭示了高危患者组织结构的改变和基质重塑的增强

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作者:Andrea J Radtke ,Ekaterina Postovalova ,Arina Varlamova ,Alexander Bagaev ,Maria Sorokina ,Olga Kudryashova ,Mark Meerson ,Margarita Polyakova ,Ilia Galkin ,Viktor Svekolkin ,Sergey Isaev ,Daniil Wiebe ,Anna Sharun ,Alexander Sarachakov ,Grigory Perelman ,Yaroslav Lozinsky ,Ziv Yaniv ,Bradley C Lowekamp ,Emily Speranza ,Li Yao ,Stefania Pittaluga ,Arthur L Shaffer 3rd ,Danny Jonigk ,James D Phelan ,Theresa Davies-Hill ,Da Wei Huang ,Pavel Ovcharov ,Krystle Nomie ,Ekaterina Nuzhdina ,Nikita Kotlov ,Ravshan Ataullakhanov ,Nathan Fowler ,Michael Kelly ,Jagan Muppidi ,Jeremy L Davis ,Jonathan M Hernandez ,Wyndham H Wilson ,Elaine S Jaffe ,Louis M Staudt ,Mark Roschewski ,Ronald N Germain

Abstract

Follicular lymphoma (FL) is a generally incurable malignancy that evolves from developmentally blocked germinal center (GC) B cells. To promote survival and immune escape, tumor B cells undergo significant genetic changes and extensively remodel the lymphoid microenvironment. Dynamic interactions between tumor B cells and the tumor microenvironment (TME) are hypothesized to contribute to the broad spectrum of clinical behaviors observed among FL patients. Despite the urgent need, existing clinical tools do not reliably predict disease behavior. Using a multi-modal strategy, we examined cell-intrinsic and -extrinsic factors governing progression and therapeutic outcomes in FL patients enrolled onto a prospective clinical trial. By leveraging the strengths of each platform, we identify several tumor-specific features and microenvironmental patterns enriched in individuals who experience early relapse, the most high-risk FL patients. These features include stromal desmoplasia and changes to the follicular growth pattern present 20 months before first progression and first relapse.

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