Highly detailed steered molecular dynamics simulations are performed on differently glycosylated receptor binding domains of the severe acute respiratory syndrome coronavirus-2 spike protein. The binding strength and the binding range increase with glycosylation. The interaction energy rises very quickly when pulling the proteins apart and only slowly drops at larger distances. We see a catch-slip-type behavior whereby interactions during pulling break and are taken over by new interactions forming. The dominant interaction mode is hydrogen bonds, but Lennard-Jones and electrostatic interactions are relevant as well.
SARS-CoV-2 spike binding to ACE2 is stronger and longer ranged due to glycan interaction.
由于聚糖相互作用,SARS-CoV-2 刺突蛋白与 ACE2 的结合更强、作用范围更广
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作者:Huang Yihan, Harris Bradley S, Minami Shiaki A, Jung Seongwon, Shah Priya S, Nandi Somen, McDonald Karen A, Faller Roland
| 期刊: | Biophysical Journal | 影响因子: | 3.100 |
| 时间: | 2022 | 起止号: | 2022 Jan 4; 121(1):79-90 |
| doi: | 10.1016/j.bpj.2021.12.002 | 靶点: | ACE2 |
| 研究方向: | 炎症/感染 | 疾病类型: | 新冠 |
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