Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease

动态 GATA4 增强子塑造对心脏发育和疾病至关重要的染色质景观

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作者:Aibin He, Fei Gu, Yong Hu, Qing Ma, Lillian Yi Ye, Jennifer A Akiyama, Axel Visel, Len A Pennacchio, William T Pu

Abstract

How stage-specific enhancer dynamics modulate gene expression patterns essential for organ development, homeostasis and disease is not well understood. Here, we addressed this question by mapping chromatin occupancy of GATA4--a master cardiac transcription factor--in heart development and disease. We find that GATA4 binds and participates in establishing active chromatin regions by stimulating H3K27ac deposition, which facilitates GATA4-driven gene expression. GATA4 chromatin occupancy changes markedly between fetal and adult heart, with a limited binding sites overlap. Cardiac stress restored GATA4 occupancy to a subset of fetal sites, but many stress-associated GATA4 binding sites localized to loci not occupied by GATA4 during normal heart development. Collectively, our data show that dynamic, context-specific transcription factors occupancy underlies stage-specific events in development, homeostasis and disease.

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