Genome-wide CRISPR screens identify critical targets to enhance CAR-NK cell antitumor potency

全基因组 CRISPR 筛选鉴定出增强 CAR-NK 细胞抗肿瘤效力的关键靶点

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作者:Alexander Biederstädt ,Rafet Basar ,Jeong-Min Park ,Nadima Uprety ,Rejeena Shrestha ,Francia Reyes Silva ,Merve Dede ,John Watts ,Sunil Acharya ,Donghai Xiong ,Bin Liu ,May Daher ,Hind Rafei ,Pinaki Banerjee ,Ping Li ,Sanjida Islam ,Huihui Fan ,Mayra Shanley ,Jingling Jin ,Bijender Kumar ,Vernikka Woods ,Paul Lin ,Silvia Tiberti ,Ana Karen Nunez Cortes ,Xin Ru Jiang ,Inci Biederstädt ,Patrick Zhang ,Ye Li ,Seema Rawal ,Enli Liu ,Luis Muniz-Feliciano ,Gary M Deyter ,Elizabeth J Shpall ,Natalie Wall Fowlkes ,Ken Chen ,Katayoun Rezvani

Abstract

Adoptive cell therapy using engineered natural killer (NK) cells is a promising approach for cancer treatment, with targeted gene editing offering the potential to further enhance their therapeutic efficacy. However, the spectrum of actionable genetic targets to overcome tumor and microenvironment-mediated immunosuppression remains largely unexplored. We performed multiple genome-wide CRISPR screens in primary human NK cells and identified critical checkpoints regulating resistance to immunosuppressive pressures. Ablation of MED12, ARIH2, and CCNC significantly improved NK cell antitumor activity against multiple treatment-refractory human cancers in vitro and in vivo. CRISPR editing augmented both innate and CAR-mediated NK cell function, associated with enhanced metabolic fitness, increased secretion of proinflammatory cytokines, and expansion of cytotoxic NK cell subsets. Through high-content genome-wide CRISPR screening in NK cells, this study reveals critical regulators of NK cell function and provides a valuable resource for engineering next-generation NK cell therapies with improved efficacy against cancer.

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