BACKGROUND AND OBJECTIVES: Rinaie Marwah hot spring Kishtwar (RMHSK) is one of the geothermal springs located at 33°51'51â³N 75°32'07â³E with an elevation of 2134 meters above sea level in Jammu and Kashmir, India. We aimed to study the microbial diversity of this geothermal spring using metagenomics. MATERIALS AND METHODS: In the present study, physiochemical parameters including temperature (65-75°C), pH (6. 9-8. 8), hardness (250 ppm), and mineral content was measured along with the microbial diversity using Illumina MiSeq metagenome-based 16s amplicon sequencing (V3-V4). The sequence reads were classified taxonomically into 31 phyla, 71 classes, 152 orders, 256 families, 410 genus, and 665 species. QIIME 2 (Quantitative Insights into Microbial Ecology), an extensible, powerful, and decentralized analytical tool, was used for taxonomic analysis. RESULTS: Bacteroidota (32. 57%) was the dominant phylum, Bacteroidia (32. 51%) the dominant class, Bacteroidales (16. 6%) the dominant order, and Lentimicrobiaceae (14. 23%) was the dominant family per the abundance analysis. Shannon (2. 28) and Chao 1 (87. 0) diversity indices support the existence of higher microbial diversity in RMHSK (50717 OTUs). CONCLUSION: The microbial diversity of RMHSK is reported for the first time through a metagenomic study. Identification of microorganisms with characteristics that are relevant to industries.
Building the taxonomic profile of the Riniaie Marwah hot spring of Kishtwar in Jammu and Kashmir: the first high-throughput sequencing-based metagenome study.
构建查谟和克什米尔基什特瓦尔Riniaie Marwah温泉的分类学概况:首个基于高通量测序的宏基因组研究
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作者:Wani Atif Khurshid, Ahmad Suhail, Américo-Pinheiro Juliana Heloisa Pinê, Tizro Nazli, Singh Reena
| 期刊: | Iranian Journal of Microbiology | 影响因子: | 1.700 |
| 时间: | 2023 | 起止号: | 2023 Dec;15(6):723-733 |
| doi: | 10.18502/ijm.v15i6.14132 | ||
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