Ebola virus infection induces a delayed type I IFN response in bystander cells and the shutdown of key liver genes in human iPSC-derived hepatocytes

埃博拉病毒感染会诱发旁观者细胞中 I 型干扰素反应延迟,并导致人类 iPSC 衍生肝细胞中关键肝脏基因关闭

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作者:Whitney A Scoon, Liliana Mancio-Silva, Ellen L Suder, Carlos Villacorta-Martin, Jonathan Lindstrom-Vautrin, John G Bernbaum, Steve Mazur, Reed F Johnson, Judith Olejnik, Elizabeth Y Flores, Aditya Mithal, Feiya Wang, Adam J Hume, Joseph E Kaserman, Sandra March-Riera, Andrew A Wilson, Sangeeta N Bha

Abstract

Liver damage and an exacerbated inflammatory response are hallmarks of Ebola virus (EBOV) infection. Little is known about the intrinsic response to infection in human hepatocytes and their contribution to inflammation. Here, we present an induced pluripotent stem cell (iPSC)-derived hepatocyte-like cell (HLC) platform to define the hepato-intrinsic response to EBOV infection. We used this platform to show robust EBOV infection, with characteristic ultrastructural changes and evidence for viral replication. Transcriptomics analysis revealed a delayed response with minimal early transcriptomic changes, followed by a general downregulation of hepatic function and upregulation of interferon signaling, providing a potential mechanism by which hepatocytes participate in disease severity and liver damage. Using RNA-fluorescence in situ hybridization (FISH), we showed that IFNB1 and CXCL10 were mainly expressed in non-infected bystander cells. We did not observe an inflammatory signature during infection. In conclusion, iPSC-HLCs are an immune competent platform to study responses to EBOV infection.

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