Anaerobium acetethylicum strain GluBS11(T) belongs to the family Lachnospiraceae within the order Clostridiales. It is a Gram-positive, non-motile and strictly anaerobic bacterium isolated from biogas slurry that was originally enriched with gluconate as carbon source (Patil, et al., Int J Syst Evol Microbiol 65:3289-3296, 2015). Here we describe the draft genome sequence of strain GluBS11(T) and provide a detailed insight into its physiological and metabolic features. The draft genome sequence generated 4,609,043 bp, distributed among 105 scaffolds assembled using the SPAdes genome assembler method. It comprises in total 4,132 genes, of which 4,008 were predicted to be protein coding genes, 124 RNA genes and 867 pseudogenes. The Gâ+âC content was 43.51 mol %. The annotated genome of strain GluBS11(T) contains putative genes coding for the pentose phosphate pathway, the Embden-Meyerhoff-Parnas pathway, the Entner-Doudoroff pathway and the tricarboxylic acid cycle. The genome revealed the presence of most of the necessary genes required for the fermentation of glucose and gluconate to acetate, ethanol, and hydrogen gas. However, a candidate gene for production of formate was not identified.
High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11(T) (DSM 29698).
发酵细菌乙酰乙酸厌氧菌模式菌株 GluBS11(T) (DSM 29698) 的高质量基因组序列草图
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作者:Patil Yogita, Müller Nicolai, Schink Bernhard, Whitman William B, Huntemann Marcel, Clum Alicia, Pillay Manoj, Palaniappan Krishnaveni, Varghese Neha, Mikhailova Natalia, Stamatis Dimitrios, Reddy T B K, Daum Chris, Shapiro Nicole, Ivanova Natalia, Kyrpides Nikos, Woyke Tanja, Junghare Madan
| 期刊: | Standards in Genomic Sciences | 影响因子: | 0.000 |
| 时间: | 2017 | 起止号: | 2017 Feb 20; 12:24 |
| doi: | 10.1186/s40793-017-0236-4 | 研究方向: | 微生物学 |
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