Protocol to evaluate cell lineage stability of mouse natural and induced regulatory T cells using bisulfite sequencing

利用亚硫酸氢盐测序评估小鼠天然和诱导型调节性T细胞谱系稳定性的方案

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作者:Masaya Arai ,Aine Fukuda ,Reo Morimoto ,Yamami Nakamura ,Zhaohong Ci ,Shimon Sakaguchi

Abstract

The establishment of regulatory T cells (Treg)-specific demethylation regions (TSDRs) is essential for the Treg-lineage stability. Here, we present a protocol using bisulfite sequencing to assess Treg-lineage stability. The protocol describes the isolation of lymphocytes and DNA extraction, followed by bisulfite conversion in unmethylated CpG DNA, bisulfite PCR and cloning, and sequencing to define the TSDR methylation. This protocol uses lymph nodes and spleen tissues and can be adapted to assess the methylation status of Tregs in other tissue types.

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