Identifying radiation exposure biomarkers from mouse blood transcriptome

从小鼠血液转录组中鉴定辐射暴露生物标志物

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作者:Daniel R Hyduke ,Evagelia C Laiakis, Heng-Hong Li, Albert J Fornace Jr

Abstract

Ionising radiation is a pleiotropic stress agent that may induce a variety of adverse effects. Molecular biomarker approaches possess promise to assess radiation exposure, however, the pleiotropic nature of ionising radiation induced transcriptional responses and the historically poor inter-laboratory performance of omics-derived biomarkers serve as barriers to identification of unequivocal biomarker sets. Here, we present a whole-genome survey of the murine transcriptomic response to physiologically relevant radiation doses, 2 Gy and 8 Gy. We used this dataset with the Random Forest algorithm to correctly classify independently generated data and to identify putative metabolite biomarkers for radiation exposure.

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