Two subsets of regulatory CD8+ T cells with differential transcriptome revealed by single cell analysis

单细胞分析揭示了两种具有差异转录组的调节性CD8+ T细胞亚群

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作者:Céline Sérazin ,Lisa Dugast ,Léa Flippe ,Mathias Streitz ,Désirée-Jacqueline Wendering ,Stephan Schlickeiser ,Frederik Heinrich ,Pawel Durek ,Gabriela Maria Guerra ,Katrin Lehmann ,Mir-Farzin Mashreghi ,Harald Wajant ,Hans Dieter Volk ,Ignacio Anegon ,Laurent David ,Séverine Bézie ,Carole Guillonneau

Abstract

Although CD8+ regulatory T cells (Tregs) were described in the 1970's, they remain poorly defined compared to CD4+ Tregs. Their phenotypic heterogeneity and lack of consensus markers have hindered mechanistic studies and slowed clinical development despite their therapeutic potential. In this study, we performed single-cell RNA sequencing coupled with CITE-seq and TCR-seq on peripheral blood CD8+ T cells from four healthy donors, including the CD45RC marker to distinguish pro-inflammatory from pro-regulatory subsets. We analyzed ∼7000 freshly isolated, non-stimulated CD8+ T cells and identified two distincts CD8+ Tregs subsets, defined by HELIOS or TNFR2 expression, with unique transcriptional and surface marker profiles. Functional assays revealed potent suppressive capacity of the TNFR2+CD29lowCD45RClow/- subset. These findings were independently validated using a publicly available single-cell dataset from four additional individuals. This work provides the most comprehensive profiling of human CD8+ Tregs to date and supports their translation to clinical application.

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