Genome-wide localization and expression profiling establish Sp2 as a sequence-specific transcription factor regulating vitally important genes

全基因组定位和表达谱分析表明,Sp2 是一种序列特异性转录因子,调控着至关重要的基因。

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作者:Gloria Terrados ,Florian Finkernagel, Bastian Stielow, Dennis Sadic, Juliane Neubert, Olga Herdt, Michael Krause, Maren Scharfe, Michael Jarek, Guntram Suske

Abstract

The transcription factor Sp2 is essential for early mouse development and for proliferation of mouse embryonic fibroblasts in culture. Yet its mechanisms of action and its target genes are largely unknown. In this study, we have combined RNA interference, in vitro DNA binding, chromatin immunoprecipitation sequencing and global gene-expression profiling to investigate the role of Sp2 for cellular functions, to define target sites and to identify genes regulated by Sp2. We show that Sp2 is important for cellular proliferation that it binds to GC-boxes and occupies proximal promoters of genes essential for vital cellular processes including gene expression, replication, metabolism and signalling. Moreover, we identified important key target genes and cellular pathways that are directly regulated by Sp2. Most significantly, Sp2 binds and activates numerous sequence-specific transcription factor and co-activator genes, and represses the whole battery of cholesterol synthesis genes. Our results establish Sp2 as a sequence-specific regulator of vitally important genes.

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