Chromatin accessibility governs the differential response of cancer and T cells to arginine starvation

染色质可及性决定了癌细胞和T细胞对精氨酸饥饿的不同反应。

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作者:Nicholas T Crump,Andreas V Hadjinicolaou,Meng Xia,John Walsby-Tickle,Uzi Gileadi,Ji-Li Chen,Mashiko Setshedi,Lars R Olsen,I-Jun Lau,Laura Godfrey,Lynn Quek,Zhanru Yu,Erica Ballabio,Mike B Barnkob,Giorgio Napolitani,Mariolina Salio,Hashem Koohy,Benedikt M Kessler,Stephen Taylor,Paresh Vyas,James S O McCullagh,Thomas A Milne,Vincenzo Cerundolo

Abstract

Depleting the microenvironment of important nutrients such as arginine is a key strategy for immune evasion by cancer cells. Many tumors overexpress arginase, but it is unclear how these cancers, but not T cells, tolerate arginine depletion. In this study, we show that tumor cells synthesize arginine from citrulline by upregulating argininosuccinate synthetase 1 (ASS1). Under arginine starvation, ASS1 transcription is induced by ATF4 and CEBPβ binding to an enhancer within ASS1. T cells cannot induce ASS1, despite the presence of active ATF4 and CEBPβ, as the gene is repressed. Arginine starvation drives global chromatin compaction and repressive histone methylation, which disrupts ATF4/CEBPβ binding and target gene transcription. We find that T cell activation is impaired in arginine-depleted conditions, with significant metabolic perturbation linked to incomplete chromatin remodeling and misregulation of key genes. Our results highlight a T cell behavior mediated by nutritional stress, exploited by cancer cells to enable pathological immune evasion.

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