Increased burden of rare risk variants across gene expression networks predisposes to sporadic Parkinson's disease

基因表达网络中罕见风险变异负担的增加会增加散发性帕金森病的患病风险。

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作者:Elena Eubanks,Katelyn VanderSleen,Jiya Mody,Neha Patel,Benjamin Sacks,Mahsa Darestani Farahani,Jinying Wang,Jordan Elliott,Nora Jaber,Fulya Akçimen,Sara Bandres-Ciga,Fadel Helweh,Jun Liu,Sanjana Archakam,Robert Kimelman,Bineet Sharma,Philip Socha,Ananya Guntur,Yiming Huang,Nagendran Ramalingam,Elyse Guadagno,Tim Bartels,Ulf Dettmer,M Maral Mouradian,Amir Houshang Bahrami,Wei Dai,Jean Baum,Zheng Shi,John Hardy,Eleanna Kara  0

Abstract

Alpha-synuclein (αSyn) is an intrinsically disordered protein that accumulates in the brains of patients with Parkinson's disease (PD). Through a high-throughput screen, we recently identified 38 genes whose knockdown modulates αSyn propagation. Here, we show that, among those, TAX1BP1 regulates how αSyn interacts with lipids, and ADAMTS19 modulates how αSyn phase separates into inclusions, adding to the growing body of evidence implicating those processes in PD. Through RNA sequencing, we identify several genes that are differentially expressed after knockdown of TAX1BP1 or ADAMTS19 and carry an increased frequency of rare risk variants in patients with PD versus healthy controls. Those differentially expressed genes cluster within modules in regions of the brain that develop high degrees of αSyn pathology. We propose a model for the genetic architecture of sporadic PD: increased burden of risk variants across genetic networks dysregulates pathways underlying αSyn homeostasis and leads to pathology and neurodegeneration.

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