Regulatory network analysis of Dclk1 gene expression reveals a tuft cell-ILC2 axis that inhibits pancreatic tumor progression

Dclk1基因表达的调控网络分析揭示了簇状细胞-ILC2轴抑制胰腺肿瘤进展。

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作者:Giovanni Valenti,Pasquale Laise,Feijing Wu,Ryota Takahashi,Tuo Ruan,Alessandro Vasciaveo,Zhengyu Jiang,Hiroki Kobayashi,Masaki Sunagawa,Moritz Middelhoff,Henrik Nienhüser,Na Fu,Ermanno Malagola,Osmel Companioni,Yoku Hayakawa,Alina C Iuga,Andrea Califano,Timothy C Wang

Abstract

Doublecortin-like kinase 1 (Dclk1) expression identifies cells that are rare in normal pancreas but occur with an increased frequency in pancreatic neoplasia. The identity of these cells has been a matter of debate. We employed Dclk1 reporter mouse models and single-cell RNA sequencing (scRNA-seq) to define Dclk1-expressing cells. In normal pancreas, Dclk1 identifies subsets of ductal, islet, and acinar cells. In pancreatic neoplasia, Dclk1 identifies several cell populations, among which acinar-to-ductal metaplasia (ADM)-like cells and tuft-like cells are predominant. These two populations play opposing roles, with Dclk1+ ADM-like cells sustaining and Dclk1+ tuft-like cells restraining tumor progression. The generation of Dclk1+ tuft-like cells requires the transcription factor SPIB and is sustained by a paracrine loop involving type 2 innate lymphoid cells (ILC2s) and cancer-associated fibroblasts (CAFs) that provide interleukin (IL)-13 and IL-33, respectively. Dclk1+ tuft-like cells release angiotensinogen to restrain tumor progression. Overall, our study defines pancreatic Dclk1+ cells and unveils a protective tuft cell-ILC2 axis against pancreatic neoplasia.

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