Context-specific synthetic T cell promoters from assembled transcriptional elements

来自组装转录元件的环境特异性合成 T 细胞启动子

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作者:Jacob Appelbaum, Jia Wei, Rithun Mukherjee, Taylor Ishida, James Rosser, Chris Saxby, John Chase, Marc Carlson, Cassie Sather, Wolfgang Rahfeldt, Michael Meechan, Michael Baldwin, Lindsay Flint, Cailyn Spurrell, Joshua Gustafson, Adam Johnson, Michael Jensen

Abstract

Genetic engineering of human lymphocytes for therapeutic applications is constrained by a lack of transgene transcriptional control, resulting in a compromised therapeutic index. Incomplete understanding of transcriptional logic limits the rational design of contextually responsive genetic modules1. Here, we juxtaposed rationally curated transcriptional response element (TRE) oligonucleotides by random concatemerization to generate a library from which we selected context-specific inducible synthetic promoters (iSynPros). Through functional selection, we screened an iSynPro library for "IF-THEN" logic-gated transcriptional responses in human CD8+ T cells expressing a 4-1BB second generation chimeric antigen receptor (CAR). iSynPros exhibiting stringent off-states in quiescent T cells and CAR activation-dependent transcriptional responsiveness were cloned and subjected to TRE composition and pattern analysis, as well as performance in regulating candidate antitumor potency enhancement modules. These data reveal synthetic TRE grammar can mediate logic-gated transgene transcription in human T cells that, when applied to CAR T cell engineering, enhance potency and improve therapeutic indices.

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