De novo design of a peptide modulator to reverse sodium channel dysfunction linked to cardiac arrhythmias and epilepsy

从头设计一种肽调节剂,以逆转与心律失常和癫痫相关的钠通道功能障碍

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作者:Ryan Mahling ,Bence Hegyi ,Erin R Cullen ,Timothy M Cho ,Aaron R Rodriques ,Lucile Fossier ,Marc Yehya ,Lin Yang ,Bi-Xing Chen ,Alexander N Katchman ,Nourdine Chakouri ,Ruiping Ji ,Elaine Y Wan ,Jared Kushner ,Steven O Marx ,Sergey Ovchinnikov ,Christopher D Makinson ,Donald M Bers ,Manu Ben-Johny

Abstract

Ion channels orchestrate electrical signaling in excitable cells. In nature, ion channel function is customized by modulatory proteins that have evolved to fulfill distinct physiological needs. Yet, engineering synthetic modulators that precisely tune ion channel function is challenging. One example involves the voltage-gated sodium (NaV) channel that initiates the action potential and whose dysfunction amplifies the late/persistent sodium current (INaL), a commonality that underlies various human diseases, including cardiac arrhythmias and epilepsy. Here, using a computational protein design platform, we engineered a de novo peptide modulator, engineered late-current inhibitor X by inactivation-gate release (ELIXIR), that binds NaV channels with submicromolar affinity. Functional analysis revealed unexpected selectivity in inhibiting "pathogenic" INaL and confirmed its effectiveness in reversing NaV dysfunction linked to both cardiac arrhythmias and epilepsy in cellular and murine models. These findings exemplify the efficacy of de novo protein design for engineering synthetic ion channel modulators and set the stage for the rational design of future therapeutic approaches. Keywords: LQT3; cardiac arrhythmia; de novo protein design; epilepsy; ion channelopathies; ion channels; late sodium current; sodium channelopathy; sodium channels; synthetic modulators.

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