Covalent inhibitor design confers activity against both GDP- and GTP-bound forms of KRAS G12C.

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作者:Condakes Matthew L, Zhang Zhuo, Danahy Derek B, Moore Richard R, Lakkaraju Sirish Kaushik, Zhuo Xiaoliang, Amako Yuka, Borzilleri Robert M, Balachander Srividya B, Chourb Lisa, Civiello Rita L, Dongre Ashok R, Downes Daniel P, Drexler Dieter M, Dudiak Brianne M, Dzhekieva Liudmila, El-Samin Miriam, Fink Brian E, Frederick Kosea, Huang Cherrie, Khan Javed, Lees Emma, Levins Christopher G, McCarthy Courtney, Mintier Gabriel A, Mosure Katherine, Parker Michael F, Powles Ryan, Qi Jie, Ruzanov Max, Sharma Sanya, Sheriff Steven, Singh Ashish K, Stedman Justin, Szapiel Nicolas, Thompson Rebecca L, Vaccaro Wayne, Wang Tai, Yang Tianfu, You Dan, Meyer Matthew J, Bronson Joanne J, Stewart Michelle L
The discovery of KRAS G12C inactive state inhibitors represented a significant advancement in the field of precision oncology. While inactive state inhibition shows promise in patients, Switch II (SWII)-binding inhibitors targeting both inactive and active states remain an underdeveloped therapeutic modality. Here, we describe the discovery of such KRAS G12C dual inhibitors that bind the SWII allosteric site using a chemically differentiated warhead to covalently modify both the KRAS G12C inactive and active states. Co-crystal structures reveal that these inhibitors perturb a key water-mediated hydrogen bonding network and trigger allosteric remodeling of the GTP-bound protein surface and SWI that prevents binding to downstream effectors. Consistent with simultaneous targeting of the active and inactive states, dual inhibitors provide rapid covalent target engagement and suppression of MAPK signaling. However, they demonstrate similar efficacy in cellular and in vivo models when compared to inactive state-selective ones despite faster target inactivation. Furthermore, both inhibitor classes show similar cellular efficacy in the presence of growth factors that drive KRAS, wt NRAS, and wt HRAS to the active state. These data provide the first detailed account of targeting both the active and inactive states of KRAS G12C and highlight the absence of a mechanistic advantage in contexts dependent on prolonged target inhibition.

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