Development of a Novel Lead that Targets M. tuberculosis Polyketide Synthase 13

开发一种靶向结核分枝杆菌聚酮合酶13的新型先导化合物

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作者:Anup Aggarwal ,Maloy K Parai ,Nishant Shetty ,Deeann Wallis ,Lisa Woolhiser ,Courtney Hastings ,Noton K Dutta ,Stacy Galaviz ,Ramesh C Dhakal ,Rupesh Shrestha ,Shoko Wakabayashi ,Chris Walpole ,David Matthews ,David Floyd ,Paul Scullion ,Jennifer Riley ,Ola Epemolu ,Suzanne Norval ,Thomas Snavely ,Gregory T Robertson ,Eric J Rubin ,Thomas R Ioerger ,Frik A Sirgel ,Ruben van der Merwe ,Paul D van Helden ,Peter Keller ,Erik C Böttger ,Petros C Karakousis ,Anne J Lenaerts ,James C Sacchettini

Abstract

Widespread resistance to first-line TB drugs is a major problem that will likely only be resolved through the development of new drugs with novel mechanisms of action. We have used structure-guided methods to develop a lead molecule that targets the thioesterase activity of polyketide synthase Pks13, an essential enzyme that forms mycolic acids, required for the cell wall of Mycobacterium tuberculosis. Our lead, TAM16, is a benzofuran class inhibitor of Pks13 with highly potent in vitro bactericidal activity against drug-susceptible and drug-resistant clinical isolates of M. tuberculosis. In multiple mouse models of TB infection, TAM16 showed in vivo efficacy equal to the first-line TB drug isoniazid, both as a monotherapy and in combination therapy with rifampicin. TAM16 has excellent pharmacological and safety profiles, and the frequency of resistance for TAM16 is ∼100-fold lower than INH, suggesting that it can be developed as a new antitubercular aimed at the acute infection. PAPERCLIP. Keywords: Mycobacterium tuberculosis; Pks13 thioesterase domain; benzofuran inhibitors; crystal structure; polyketide synthase; structure-based drug discovery.

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