Virtual screening and molecular dynamics studies of antivenom using flavonoid compounds derived from Andrographis echioides

利用从穿心莲中提取的黄酮类化合物进行抗蛇毒血清的虚拟筛选和分子动力学研究

阅读:1

Abstract

The antivenom potential of Andrographis echioides (A. echioides), a traditional medicinal herb, was investigated using a comprehensive in silico approach to address the limitations of conventional antivenoms against Russell's viper envenomation. This study aimed to conduct virtual screening and molecular dynamics (MD) studies of flavonoid compounds from A. echioides to explore their potential as antivenom agents. Gas chromatography-mass spectrometry (GC-MS) analysis identified 84 bioactive phytochemicals in the leaf extracts. The selected flavonoid constituents were evaluated for their predicted inhibitory potential against venom-associated enzymes using molecular docking with the iGEMDOCK software. The target proteins included metalloproteinase (PDB ID: 2E3X), serine proteinase (PDB ID: 3S9A), and human pancreatic phospholipase A2 (PDB ID: 6Q42). Among the screened compounds, decanoic acid (- 93.7429 kcal/mol), oxalic acid 6-ethyloct-3-yl isohexyl ester (- 91.6448 kcal/mol), and oxalic acid 6-ethyloct-3-yl hexyl ester (- 85.7934 kcal/mol) exhibited the highest binding affinities to the target protein and compared them with the standard compound. Drug-likeness analysis confirmed the favorable pharmacokinetic properties of compounds. MD simulations spanning 100 ns revealed stable binding interactions, consistent RMSD values, favorable hydrogen bonding patterns, and stable structural dynamics. This is the first study to report the antivenom potential of bioactive compounds from this species using computational methods. These computational insights suggest that flavonoid constituents derived from A. echioides may possess promising binding and predicted inhibitory activities against key venom enzymes, warranting further investigation as potential natural antivenom agents.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。