Phylogeny and divergence times inferred from rps16 sequence data analyses for Tricyrtis (Liliaceae), an endemic genus of north-east Asia

基于rps16序列数据分析推断东北亚特有属——油点草属(百合科)的系统发育关系和分歧时间

阅读:1

Abstract

BACKGROUND AND AIMS: Tricyrtis is a genus of monocots with attractive and sophisticated flower shapes and colours, endemic to north-east Asia. There are 18 known species. The highly restricted geographical distribution of the genus is of great interest in terms of both abiotic (continental drift) and biotic (long-distance dispersal) impacts on monocot plant speciation events and their timing, and of evolutionary patterns of diversification leading to the extant taxa. The aims of this study were to (i) predict the time of speciation (divergence) events at infraspecific levels of Tricyrtis, (ii) estimate the rate of evolution of the genus and (iii) provide information on an excellent plant model system in terms of studying loss of biodiversity or extinction of organisms in the dynamic earth environment. METHODOLOGY: To investigate the divergence time and evolution rate of Tricyrtis, Bayesian Markov chain Monte Carlo (MCMC) analyses were performed by calculating the mean branch lengths of evolutionary paths based on base substitution variations between rps16 intron nucleotide sequences from the 18 known species. PRINCIPAL RESULTS: Based upon the relaxed molecular clock model test data, a Bayesian phylogenetic inference tree is presented, and the divergence times and rate of evolution of Tricyrtis were estimated. The analyses also suggest that evolution is occurring at the infraspecific level of the genus in a manner that is not strictly clock bound. CONCLUSIONS: Continental drift may have been the main speciation process giving rise to the current distribution of the taxa of Tricyrtis. The single-locus gene sequence data presented here are a significant step towards an improved future understanding of the molecular evolution of Tricyrtis via multi-locus evaluation.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。