Single-cell RNA-sequencing of PBMCs from SAVI patients reveals disease-associated monocytes with elevated integrated stress response

对SAVI患者外周血单核细胞进行单细胞RNA测序,发现疾病相关的单核细胞具有升高的整合应激反应。

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作者:Camille de Cevins ,Laure Delage ,Maxime Batignes ,Quentin Riller ,Marine Luka ,Anne Remaury ,Boris Sorin ,Tinhinane Fali ,Cécile Masson ,Bénédicte Hoareau ,Catherine Meunier ,Mélanie Parisot ,Mohammed Zarhrate ,Brieuc P Pérot ,Víctor García-Paredes ,Francesco Carbone ,Lou Galliot ,Béatrice Nal ,Philippe Pierre ,Luc Canard ,Charlotte Boussard ,Etienne Crickx ,Jean-Claude Guillemot ,Brigitte Bader-Meunier ,Alexandre Bélot ,Pierre Quartier ,Marie-Louise Frémond ,Bénédicte Neven ,Galina Boldina ,Franck Augé ,Fischer Alain ,Michel Didier ,Frédéric Rieux-Laucat ,Mickaël M Ménager

Abstract

Gain-of-function mutations in stimulator of interferon gene 1 (STING1) result in STING-associated vasculopathy with onset in infancy (SAVI), a severe autoinflammatory disease. Although elevated type I interferon (IFN) production is thought to be the leading cause of the symptoms observed in patients, STING can induce a set of pathways, which have roles in the onset and severity of SAVI and remain to be elucidated. To this end, we performed a multi-omics comparative analysis of peripheral blood mononuclear cells (PBMCs) and plasma from SAVI patients and healthy controls, combined with a dataset of healthy PBMCs treated with IFN-β. Our data reveal a subset of disease-associated monocyte, expressing elevated CCL3, CCL4, and IL-6, as well as a strong integrated stress response, which we suggest is the result of direct PERK activation by STING. Cell-to-cell communication inference indicates that these monocytes lead to T cell early activation, resulting in their senescence and apoptosis. Last, we propose a transcriptomic signature of STING activation, independent of type I IFN response.

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