Identification of Biomarkers for Acute Myocardial Infarction Based on Cell Senescence Genes and Machine Learning

基于细胞衰老基因和机器学习的急性心肌梗死生物标志物鉴定

阅读:2

Abstract

BACKGROUND: This study aims to identify senescence-related biomarkers for ST-elevation myocardial infarction (STEMI) prognosis. METHODS: RNA expression data for STEMI samples and controls were obtained from the gene expression omnibus (GEO) database, and cellular senescence genes were acquired from CellAge database. Differential and overlap analyses were used to identify differentially expressed cellular senescence-related genes (DE-SRGs) in STEMI samples. Differentially expressed cellular senescence-related genes were further analyzed by plotting receiver operating characteristic (ROC) curves and machine learning algorithms. Gene Set Enrichment Analysis (GSEA) was employed on each biomarker. Immune-related analyses, competing endogenous RNA (ceRNA) construction, and target drug prediction were performed on biomarkers. RESULTS: This study identified 7 DE-SRGs for STEMI prognosis. Gene Set Enrichment Analysis results showed enriched pathways, including ribosomes, autophagy, allograft rejection, and autoimmune thyroid disease. Furthermore, T cells, CD4 memory resting T cells, gamma delta, monocytes, and neutrophils represented significantly different proportions between STEMI samples and controls. In addition, CEBPB was positively correlated with monocytes and neutrophils but negatively correlated with T-cell CD8. A ceRNA network was established, and 8 FDA-approved drugs were predicted. CONCLUSION: This study identified 7 cellular senescence-related biomarkers, which could lay a foundation for further study of the relationship between STEMI and cellular senescence.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。