FACS-based genome-wide CRISPR screens define key regulators of DNA damage signaling pathways

基于FACS的全基因组CRISPR筛选确定了DNA损伤信号通路的关键调控因子

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作者:Min Huang ,Fuwen Yao ,Litong Nie ,Chao Wang ,Dan Su ,Huimin Zhang ,Siting Li ,Mengfan Tang ,Xu Feng ,Bin Yu ,Zhen Chen ,Shimin Wang ,Ling Yin ,Lisha Mou ,Traver Hart ,Junjie Chen

Abstract

DNA damage-activated signaling pathways are critical for coordinating multiple cellular processes, which must be tightly regulated to maintain genome stability. To provide a comprehensive and unbiased perspective of DNA damage response (DDR) signaling pathways, we performed 30 fluorescence-activated cell sorting (FACS)-based genome-wide CRISPR screens in human cell lines with antibodies recognizing distinct endogenous DNA damage signaling proteins to identify critical regulators involved in DDR. We discovered that proteasome-mediated processing is an early and prerequisite event for cells to trigger camptothecin- and etoposide-induced DDR signaling. Furthermore, we identified PRMT1 and PRMT5 as modulators that regulate ATM protein level. Moreover, we discovered that GNB1L is a key regulator of DDR signaling via its role as a co-chaperone specifically regulating PIKK proteins. Collectively, these screens offer a rich resource for further investigation of DDR, which may provide insight into strategies of targeting these DDR pathways to improve therapeutic outcomes.

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