Systematic Immunotherapy Target Discovery Using Genome-Scale In Vivo CRISPR Screens in CD8 T Cells

利用CD8 T细胞中的全基因组体内CRISPR筛选进行系统性免疫治疗靶点发现

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作者:Matthew B Dong ,Guangchuan Wang ,Ryan D Chow ,Lupeng Ye ,Lvyun Zhu ,Xiaoyun Dai ,Jonathan J Park ,Hyunu R Kim ,Youssef Errami ,Christopher D Guzman ,Xiaoyu Zhou ,Krista Y Chen ,Paul A Renauer ,Yaying Du ,Johanna Shen ,Stanley Z Lam ,Jingjia J Zhou ,Donald R Lannin ,Roy S Herbst ,Sidi Chen

Abstract

CD8 T cells play essential roles in anti-tumor immune responses. Here, we performed genome-scale CRISPR screens in CD8 T cells directly under cancer immunotherapy settings and identified regulators of tumor infiltration and degranulation. The in vivo screen robustly re-identified canonical immunotherapy targets such as PD-1 and Tim-3, along with genes that have not been characterized in T cells. The infiltration and degranulation screens converged on an RNA helicase Dhx37. Dhx37 knockout enhanced the efficacy of antigen-specific CD8 T cells against triple-negative breast cancer in vivo. Immunological characterization in mouse and human CD8 T cells revealed that DHX37 suppresses effector functions, cytokine production, and T cell activation. Transcriptomic profiling and biochemical interrogation revealed a role for DHX37 in modulating NF-κB. These data demonstrate high-throughput in vivo genetic screens for immunotherapy target discovery and establishes DHX37 as a functional regulator of CD8 T cells.

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