Development and validation of programmed cell death related genes in intracranial aneurysms

颅内动脉瘤中程序性细胞死亡相关基因的开发和验证

阅读:4

Abstract

Intracranial aneurysm (IA) is a life-threatening condition. Programmed cell death (PCD) is central to aneurysm onset and progression. Nevertheless, a comprehensive analysis of the association between PCD and IA is lacking.We retrieved five IA-dataset including GSE13353, GSE15629, GSE26969, GSE54083, and GSE75436 from GEO database. After integrating these datasets, We calculated 9 cell death pattern scores via ssGSEA and identified ferroptosis and immunogenic cell death(ICD) as the higher relevance in the IA (AUC-ROC > 0.7).We relied on differential gene analysis and took intersections with ICD- and ferroptosis- genes, which was as the IA-PCD genes. Integrating Least absolute shrinkage and selection operator (LASSO) and support vector machine recursive feature elimination (SVM-RFE), identified two key genes, namely NLRP3 and HMOX1. In the dataset, the two genes were significantly overexpressed in patients with IA. Immune infiltration analysis showed that NLRP3 and HMOX1 could influence the extent of immune cell infiltration.For further validation, we found that the expression levels of NLRP3 and HMOX1 in the serum of IA patients were significantly higher than those in the normal group though Elisa, consistenting with the bioinformatics result. In conclusion, NLRP3 and HMOX1 are associated with IA. These findings provide a basis for further exploring potential molecular driving mechanisms and screening suitable biomarkers. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12883-026-04794-9.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。