Rapid discovery of diverse neutralizing SARS-CoV-2 antibodies from large-scale synthetic phage libraries

从大规模合成噬菌体库中快速发现多种 SARS-CoV-2 中和抗体

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作者:Tom Z Yuan, Pankaj Garg, Linya Wang, Jordan R Willis, Eric Kwan, Ana G Lujan Hernandez, Emily Tuscano, Emily N Sever, Erica Keane, Cinque Soto, Eric M Mucker, Mallorie E Fouch, Edgar Davidson, Benjamin J Doranz, Shweta Kailasan, M Javad Aman, Haoyang Li, Jay W Hooper, Erica Ollmann Saphire, James E

Abstract

Coronavirus disease 2019 (COVID-19) is an evolving global public health crisis in need of therapeutic options. Passive immunization of monoclonal antibodies (mAbs) represents a promising therapeutic strategy capable of conferring immediate protection from SARS-CoV-2 infection. Herein, we describe the discovery and characterization of neutralizing SARS-CoV-2 IgG and VHH antibodies from four large-scale phage libraries. Each library was constructed synthetically with shuffled complementarity-determining region loops from natural llama and human antibody repertoires. While most candidates targeted the receptor-binding domain of the S1 subunit of SARS-CoV-2 spike protein, we also identified a neutralizing IgG candidate that binds a unique epitope on the N-terminal domain. A select number of antibodies retained binding to SARS-CoV-2 variants Alpha, Beta, Gamma, Kappa and Delta. Overall, our data show that synthetic phage libraries can rapidly yield SARS-CoV-2 S1 antibodies with therapeutically desirable features, including high affinity, unique binding sites, and potent neutralizing activity in vitro, and a capacity to limit disease in vivo.

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