Allele-specific endogenous tagging and quantitative analysis of β-catenin in colorectal cancer cells

结直肠癌细胞中β-catenin的等位基因特异性内源性标记和定量分析

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作者:Giulia Ambrosi # ,Oksana Voloshanenko # ,Antonia F Eckert # ,Dominique Kranz ,G Ulrich Nienhaus ,Michael Boutros

Abstract

Wnt signaling plays important roles in development, homeostasis, and tumorigenesis. Mutations in β-catenin that activate Wnt signaling have been found in colorectal and hepatocellular carcinomas. However, the dynamics of wild-type and mutant forms of β-catenin are not fully understood. Here, we genome-engineered fluorescently tagged alleles of endogenous β-catenin in a colorectal cancer cell line. Wild-type and oncogenic mutant alleles were tagged with different fluorescent proteins, enabling the analysis of both variants in the same cell. We analyzed the properties of both β-catenin alleles using immunoprecipitation, immunofluorescence, and fluorescence correlation spectroscopy approaches, revealing distinctly different biophysical properties. In addition, activation of Wnt signaling by treatment with a GSK3β inhibitor or a truncating APC mutation modulated the wild-type allele to mimic the properties of the mutant β-catenin allele. The one-step tagging strategy demonstrates how genome engineering can be employed for the parallel functional analysis of different genetic variants. Keywords: FCS; Wnt signaling; cancer; cell biology; crispr; ctnnb1; endogenous tagging; fluorescence correlation spectroscopy; genetics; genomics; human; oncogenic signaling; β-catenin.

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