Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS

全基因组 CRISPR-Cas9 筛选发现白血病特异性依赖于由 DCPS 调控的 pre-mRNA 代谢通路。

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作者:Takuji Yamauchi ,Takeshi Masuda ,Matthew C Canver ,Michael Seiler ,Yuichiro Semba ,Mohammad Shboul ,Mohammed Al-Raqad ,Manami Maeda ,Vivien A C Schoonenberg ,Mitchel A Cole ,Claudio Macias-Trevino ,Yuichi Ishikawa ,Qiuming Yao ,Michitaka Nakano ,Fumio Arai ,Stuart H Orkin ,Bruno Reversade ,Silvia Buonamici ,Luca Pinello ,Koichi Akashi ,Daniel E Bauer ,Takahiro Maeda

Abstract

To identify novel targets for acute myeloid leukemia (AML) therapy, we performed genome-wide CRISPR-Cas9 screening using AML cell lines, followed by a second screen in vivo. Here, we show that the mRNA decapping enzyme scavenger (DCPS) gene is essential for AML cell survival. The DCPS enzyme interacted with components of pre-mRNA metabolic pathways, including spliceosomes, as revealed by mass spectrometry. RG3039, a DCPS inhibitor originally developed to treat spinal muscular atrophy, exhibited anti-leukemic activity via inducing pre-mRNA mis-splicing. Humans harboring germline biallelic DCPS loss-of-function mutations do not exhibit aberrant hematologic phenotypes, indicating that DCPS is dispensable for human hematopoiesis. Our findings shed light on a pre-mRNA metabolic pathway and identify DCPS as a target for AML therapy.

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