Nitrincola salilacus sp. nov., isolated from Niya Fish Salt Lake Sediment in Xinjiang, Northwest China

新种盐生硝化菌(Nitrincola salilacus sp. nov.)分离自中国西北部新疆尼亚鱼盐湖沉积物。

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Abstract

A Gram-stain-negative, aerobic, rod-shaped, oxidase- and catalase-positive and non-motile bacterium, named MINF-07-Sa-05(T), was isolated from sediment samples collected from Niya Fish Salt Lake in Xinjiang, northwest China. Phylogenetic tree based on 16S rRNA gene sequences showed that strain MINF-07-Sa-05(T) consistently fell within the genus Nitrincola and formed a clade together with Nitrincola alkalilacustris ZV-19(T) (98.97%) and Nitrincola lacisaponensis 4CA(T) (96.16%). Genomic average nucleotide identity values for strain MINF-07-Sa-05(T) with the type strains within the genus Nitrincola ranged from 69.8 to 87.8%, while the in silico DNA-DNA hybridization values for strain MINF-07-Sa-05(T) with these strains ranged from 20.4 to 33.7%. The genome sequence size of the strain was 4.81 Mb, with a DNA G+C content of 52.6 mol%. Its growth occurred at 4-40 °C, at pH 6.0-10.0, and tolerated up to 9% (w/v) NaCl. The major fatty acids contained summed feature 8 (C(18:1)  ω7c/C(18:1)  ω6c; 59.8%), summed feature 3 (C(16:1)  ω7c/C(16:1)  ω6c; 20.4%) and C(16:0) (13.8%). The primary respiratory quinone was ubiquinone-8. The main polar lipids were phosphatidylglycerol and phosphatidylethanolamine. Genomic analyses showed a high abundance of genes involved in the nitrogen, sulphur cycle and antibiotic resistance. According to the genotypic, phylogenetic and chemotaxonomic data, strain MINF-07-Sa-05(T) represents a novel species within the genus Nitrincola, for which the name Nitrincola salilacus sp. nov. is proposed. The type strain is MINF-07-Sa-05(T) (=GDMCC 1.4420(T)=JCM 37233(T)).

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