Construction of prognostic risk prediction model of endometrial carcinoma based on bioinformatics analysis

基于生物信息学分析构建子宫内膜癌预后风险预测模型

阅读:1

Abstract

This study developed a prognostic risk prediction model for endometrial carcinoma (EC) by integrating data from The Cancer Genome Atlas and Gene Expression Omnibus for bioinformatics analysis. The relevant data of EC were downloaded from The Cancer Genome Atlas database and the GSE17025 dataset of the Gene Expression Omnibus database. Based on the R language, the differentially expressed genes (DEGs) and weighted gene co-expression network analysis were used to identify the gene modules with the strongest correlation with clinical features, and intersected with the DEGs of GSE17025 dataset. Subsequently, univariate and multivariate Cox regression analyses were conducted to construct and validate a prognostic risk prediction model for EC. Weighted gene co-expression network analysis identified 6 gene modules, with the turquoise module exhibiting the strongest correlation with EC prognosis and survival. By intersecting with DEGs from GSE17025 dataset, 65 candidate genes were identified. Univariate Cox regression revealed 19 genes significantly associated with overall survival, and multivariate Cox regression identified 5 prognostic genes. A 5-gene risk prediction model, including PDZ domain containing ring finger 3, KN motif and ankyrin repeat domains 4, prion protein, phosphoserine aminotransferase 1, and Annexin A1, was constructed. Kaplan-Meier survival curve analysis demonstrated that patients in the high-risk group had significantly lower overall survival compared to the low-risk group (P < .001). The ROC curve confirmed the model's robust prognostic predictive performance. This study presents a 5-gene prognostic risk prediction model for EC, including PDZ domain containing ring finger 3, KN motif and ankyrin repeat domains 4, prion protein, phosphoserine aminotransferase 1, and Annexin A1, which can effectively predict patients' prognosis and provide a reference for the clinical diagnosis and targeted therapy of EC.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。