Identification and analysis of the endoplasmic reticulum stress hub genes in sepsis-associated ARDS

脓毒症相关ARDS中内质网应激枢纽基因的鉴定和分析

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Abstract

Acute respiratory distress syndrome (ARDS) is one of the most common and serious complications in the development of sepsis. Endoplasmic reticulum stress (ERS) plays an important role in the pathophysiologic process of sepsis-associated ARDS. The aim of this study was to identify and analyze hub genes related to ERS in sepsis-associated ARDS using bioinformatics and machine learning algorithms, which may serve as diagnostic markers and therapeutic targets. Based on the GSE32707 dataset from the GEO database, differentially expressed genes (DEGs) between patients with sepsis-associated acute respiratory distress syndrome (ARDS) and healthy controls were identified. A comprehensive evaluation was performed by integrating functional enrichment analysis, immune cell infiltration analysis, and weighted gene co-expression network analysis (WGCNA). By intersecting DEGs, key WGCNA module genes, and ERS-related genes(ERGs), ERS-associated differential genes in sepsis-related ARDS were obtained. Subsequently, three machine learning algorithms-least absolute shrinkage and selection operator (LASSO), random forest (RF), and support vector machine (SVM)-were used to further screen for hub ERS hub genes. The diagnostic value of these hub genes was assessed using receiver operating characteristic (ROC) curve analysis. Finally, their expression levels were validated in clinical samples using RT-qPCR. A total of 438 DEGs and five hub genes-STAT3, HSPB1, YWHAQ, LCN2, and SGK1-were identified.Diagnostic performance analysis demonstrated that all five genes had favorable discriminatory power, indicating their potential clinical utility.Further validation in clinical samples confirmed the reliability of the bioinformatics analysis. RT-qPCR results showed that STAT3 was significantly upregulated, while YWHAQ was significantly downregulated in sepsis-associated ARDS samples compared to healthy controls, with both differences reaching statistical significance. In conclusion, STAT3 and YWHAQ, as ERS-related key genes, not only play pivotal roles in sepsis-associated ARDS but also hold promise as diagnostic biomarkers and potential therapeutic targets.

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