Zero-shot learning enables instant denoising and super-resolution in optical fluorescence microscopy

零样本学习可实现光学荧光显微镜的即时去噪和超分辨率

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作者:Chang Qiao #, Yunmin Zeng #, Quan Meng #, Xingye Chen #, Haoyu Chen, Tao Jiang, Rongfei Wei, Jiabao Guo, Wenfeng Fu, Huaide Lu, Di Li, Yuwang Wang, Hui Qiao, Jiamin Wu, Dong Li, Qionghai Dai

Abstract

Computational super-resolution methods, including conventional analytical algorithms and deep learning models, have substantially improved optical microscopy. Among them, supervised deep neural networks have demonstrated outstanding performance, however, demanding abundant high-quality training data, which are laborious and even impractical to acquire due to the high dynamics of living cells. Here, we develop zero-shot deconvolution networks (ZS-DeconvNet) that instantly enhance the resolution of microscope images by more than 1.5-fold over the diffraction limit with 10-fold lower fluorescence than ordinary super-resolution imaging conditions, in an unsupervised manner without the need for either ground truths or additional data acquisition. We demonstrate the versatile applicability of ZS-DeconvNet on multiple imaging modalities, including total internal reflection fluorescence microscopy, three-dimensional wide-field microscopy, confocal microscopy, two-photon microscopy, lattice light-sheet microscopy, and multimodal structured illumination microscopy, which enables multi-color, long-term, super-resolution 2D/3D imaging of subcellular bioprocesses from mitotic single cells to multicellular embryos of mouse and C. elegans.

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