APEX2-based proximity proteomic analysis identifies candidate interactors for Plasmodium falciparum knob-associated histidine-rich protein in infected erythrocytes

基于 APEX2 的邻近蛋白质组学分析确定了感染红细胞中恶性疟原虫旋钮相关组氨酸富集蛋白的候选相互作用蛋白

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作者:Sébastien Charneau #, Lucas Silva de Oliveira #, Zenon Zenonos, Christine S Hopp, Izabela M D Bastos, Damarys Loew, Bérangère Lombard, Ariane Pandolfo Silveira, Giovanna de Carvalho Nardeli Basílio Lobo, Sônia Nair Bao, Philippe Grellier, Julian C Rayner

Abstract

The interaction of Plasmodium falciparum-infected red blood cells (iRBCs) with the vascular endothelium plays a crucial role in malaria pathology and disease. KAHRP is an exported P. falciparum protein involved in iRBC remodelling, which is essential for the formation of protrusions or "knobs" on the iRBC surface. These knobs and the proteins that are concentrated within them allow the parasites to escape the immune response and host spleen clearance by mediating cytoadherence of the iRBC to the endothelial wall, but this also slows down blood circulation, leading in some cases to severe cerebral and placental complications. In this work, we have applied genetic and biochemical tools to identify proteins that interact with P. falciparum KAHRP using enhanced ascorbate peroxidase 2 (APEX2) proximity-dependent biotinylation and label-free shotgun proteomics. A total of 30 potential KAHRP-interacting candidates were identified, based on the assigned fragmented biotinylated ions. Several identified proteins have been previously reported to be part of the Maurer's clefts and knobs, where KAHRP resides. This study may contribute to a broader understanding of P. falciparum protein trafficking and knob architecture and shows for the first time the feasibility of using APEX2-proximity labelling in iRBCs.

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