Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. using the relative complexity measure
测试相对复杂性度量方法的稳健性,使用相对复杂性度量为 Galanthus L. 构建稳健的系统发育树
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作者:Yasin Bakış, Hasan H Otu, Nivart Taşçı, Cem Meydan, Neş'e Bilgin, Sırrı Yüzbaşıoğlu, O Uğur Sezerman
| 期刊: | BMC Bioinformatics | 影响因子: | 2.900 |
| 时间: | 2013 | 起止号: | 2013 Jan 17:14:20. |
| doi: | 10.1186/1471-2105-14-20 | 研究方向: | 信号转导 |
Background
Most phylogeny analysis
Conclusions
Phylogenies generated by Relative Complexity Measure were found to be robust and results of RCM were more reliable than the compared techniques. Particularly, to overcome MSA-based problems, RCM seems to be a reasonable way and a good alternative to MSA-based phylogenetic analysis. We believe our method will become a mainstream phylogeny construction method especially for the highly variable sequence families where the accuracy of the MSA heavily depends on the alignment parameters.
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