DNA copy number profiling reveals extensive genomic loss in hereditary BRCA1 and BRCA2 ovarian carcinomas

DNA 拷贝数分析揭示遗传性 BRCA1 和 BRCA2 卵巢癌中存在大量基因组丢失

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作者:M M Kamieniak, I Muñoz-Repeto, D Rico, A Osorio, M Urioste, J García-Donas, S Hernando, L Robles-Díaz, T Ramón Y Cajal, A Cazorla, R Sáez, J M García-Bueno, S Domingo, S Borrego, J Palacios, M A van de Wiel, B Ylstra, J Benítez, M J García

Background

Few studies have attempted to characterise genomic changes occurring in hereditary epithelial ovarian carcinomas (EOCs) and inconsistent

Conclusion

Somatic alterations occurring in the development of familial EOCs do not differ substantially from the ones occurring in sporadic carcinomas. However, some specific features like extensive genomic loss observed in BRCA1/2 tumours may be of clinical relevance helping to identify BRCA-related patients likely to respond to PARP inhibitors.

Methods

High-resolution array Comparative Genomic Hybridisation profiling of 53 familial (21 BRCA1, 6 BRCA2 and 26 non-BRCA1/2) and 15 sporadic tumours in combination with supervised and unsupervised analysis was used to define common and/or specific copy number features.

Results

Unsupervised hierarchical clustering did not stratify tumours according to their familial or sporadic condition or to their BRCA1/2 mutation status. Common recurrent changes, spanning genes potentially fundamental for ovarian carcinogenesis, regardless of BRCA mutations, and several candidate subtype-specific events were defined. Despite similarities, greater contribution of losses was revealed to be a hallmark of BRCA1 and BRCA2 tumours.

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