Shotgun Proteomics of Co-Cultured Leukemic and Bone Marrow Stromal Cells from Different Species as a Preliminary Approach to Detect Intercellular Protein Transfer

利用不同物种共培养的白血病细胞和骨髓基质细胞的鸟枪法蛋白质组学技术,初步检测细胞间蛋白质转移

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作者:Abraham Josué Nevárez-Ramírez ,Ana Laura Guzmán-Ortiz ,Pedro Cortes-Reynosa ,Eduardo Perez-Salazar ,Gustavo Alberto Jaimes-Ortega ,Ricardo Valle-Rios ,Álvaro Marín-Hernández ,José S Rodríguez-Zavala ,Eliel Ruiz-May ,José Luis Castrejón-Flores ,Héctor Quezada

Abstract

Cellular interactions within the bone marrow microenvironment modulate the properties of subsets of leukemic cells leading to the development of drug-resistant phenotypes. The intercellular transfer of proteins and organelles contributes to this process but the set of transferred proteins and their effects in the receiving cells remain unclear. This study aimed to detect the intercellular protein transfer from mouse bone marrow stromal cells (OP9 cell line) to human T-lymphoblasts (CCRF-CEM cell line) using nanoLC-MS/MS-based shotgun proteomics in a 3D co-culture system. After 24 h of co-culture, 1513 and 67 proteins from human and mouse origin, respectively, were identified in CCRF-CEM cells. The presence of mouse proteins in the human cell line, detected by analyzing the differences in amino acid sequences of orthologous peptides, was interpreted as the result of intercellular transfer. The transferred proteins might have contributed to the observed resistance to vincristine, methotrexate, and hydrogen peroxide in the co-cultured leukemic cells. Our results suggest that shotgun proteomic analyses of co-cultured cells from different species could be a simple option to get a preliminary survey of the proteins exchanged among interacting cells.

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