Genome-wide association study for grain zinc concentration in bread wheat (Triticum aestivum L.)

小麦(Triticum aestivum L.)籽粒锌浓度的全基因组关联研究

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作者:Jianhui Ma, Miaomiao Ye, Qianqian Liu, Meng Yuan, Daijing Zhang, Chunxi Li, Qingdong Zeng, Jianhui Wu, Dejun Han, Lina Jiang

Discussion

A novel QTL was first identified on chromosome 6D, this finding enriches our understanding of the genetic basis of GZnC in wheat. This study provides new insights into valuable markers and candidate genes for wheat biofortification to improve GZnC.

Methods

In this study, we constructed a population of 382 wheat accessions and determined their GZnC in three field environments. Phenotype data was used for a genome-wide association study (GWAS) using a 660K single nucleotide polymorphism (SNP) array, and haplotype analysis identified an important candidate gene for GZnC.

Results

We found that GZnC of the wheat accessions showed an increasing trend with their released years, indicating that the dominant allele of GZnC was not lost during the breeding process. Nine stable quantitative trait loci (QTLs) for GZnC were identified on chromosomes 3A, 4A, 5B, 6D, and 7A. And an important candidate gene for GZnC, namely, TraesCS6D01G234600, and GZnC between the haplotypes of this gene showed, significant difference (P ≤ 0.05) in three environments.

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