m(5)C related-regulator-mediated methylation modification patterns and prognostic significance in breast cancer

m(5)C相关调节因子介导的甲基化修饰模式及其在乳腺癌中的预后意义

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Abstract

5-Methylcytosine (m(5)C) is closely associated with cancer. However, the role of m(5)C in breast cancer(BC)remains unclear. This study combined single-cell RNA sequencing (scRNA-Seq) and transcriptomics datasets to screen m(5)C regulators associated with BC progression and analyze their clinical values. Firstly, This study elucidates the mechanisms of the m(5)C landscape and the specific roles of m(5)C regulators in BC patients. we found that the dysregulation of m(5)C regulators with m(5)Cscore play the essential role of the carcinogenesis and progression in epithelial cells and myeloid cells of BC at single cell level. External validation was conducted using an independent scRNA-Seq datasets. Then, three distinct m(5)C modification patterns were identified by transcriptomics datasets. Based on the m(5)C differentially expressed regulators, the m(5)Cscore was constructed, and used to divide patients with BC into high and low m(5)Cscore groups. Patients with a high m(5)Cscore had more abundant immune cell infiltration, stronger antitumor immunity, and better prognoses. Finally, Quantitative real-time (PCR) and immunohistochemistry were used for the in vitro experimental validation, which had extensive prognostic value. In this study, we aimed to assess the expression of m(5)C regulators involved in BC and investigate their correlation with the tumor microenvironment, clinicopathological characteristics, and prognosis of BC. The m(5)C regulators could be used to effectively assess the cell specific regulation prognosis of patients with BC and develop more effective immunotherapy strategies.

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