Cell culture systems for isolation of SARS-CoV-2 clinical isolates and generation of recombinant virus

用于分离SARS-CoV-2临床分离株和生成重组病毒的细胞培养系统

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作者:Da-Yuan Chen,Jacquelyn Turcinovic ,Shuchen Feng,Devin J Kenney ,Chue Vin Chin,Manish C Choudhary ,Hasahn L Conway,Marc Semaan,Brianna J Close ,Alexander H Tavares,Scott Seitz ,Nazimuddin Khan,Sebastian Kapell,Nicholas A Crossland ,Jonathan Z Li ,Florian Douam ,Susan C Baker,John H Connor ,Mohsan Saeed

Abstract

A simple and robust cell culture system is essential for generating authentic SARS-CoV-2 stocks for evaluation of viral pathogenicity, screening of antiviral compounds, and preparation of inactivated vaccines. Evidence suggests that Vero E6, a cell line commonly used in the field to grow SARS-CoV-2, does not support efficient propagation of new viral variants and triggers rapid cell culture adaptation of the virus. We generated a panel of 17 human cell lines overexpressing SARS-CoV-2 entry factors and tested their ability to support viral infection. Two cell lines, Caco-2/AT and HuH-6/AT, demonstrated exceptional susceptibility, yielding highly concentrated virus stocks. Notably, these cell lines were more sensitive than Vero E6 cells in recovering SARS-CoV-2 from clinical specimens. Further, Caco-2/AT cells provided a robust platform for producing genetically reliable recombinant SARS-CoV-2 through a reverse genetics system. These cellular models are a valuable tool for the study of SARS-CoV-2 and its continuously emerging variants.

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